ClusterScoreMethod Enumeration

.NET Bio

Bio.Algorithms.Alignment

AlignedSequence Class

AlignmentInfo Class

ClusterBuilder Class

ClusterScoreMethod Enumeration

DeltaAlignment Class

DynamicProgrammingPairwiseAligner Class

DynamicProgrammingPairwiseAligner.OptScoreCell Structure

DynamicProgrammingPairwiseAlignerJob Class

DynamicProgrammingPairwiseAlignerJob.WeightFunction Delegate

IAlignedSequence Interface

IAlignmentAttributes Interface

IClusterBuilder Interface

IMultipleSequenceAligner Interface

IPairwiseSequenceAligner Interface

IPairwiseSequenceAlignment Interface

ISequenceAligner Interface

ISequenceAlignment Interface

ModifiedSmithWaterman Class

MultiSequenceAlignment Class

NeedlemanWunschAligner Class

NUCmerAttributes Class

NucmerPairwiseAligner Class

PairwiseAlignedSequence Class

PairwiseAlignmentAttributes Class

PairwiseOverlapAffineAlignmentJob Class

PairwiseOverlapAligner Class

PairwiseOverlapSimpleAlignmentJob Class

PairwiseSequenceAligner Class

PairwiseSequenceAligner.OptScoreMatrixCell Class

PairwiseSequenceAlignment Class

SequenceAligners Class

SequenceAlignment Class

SmithWatermanAligner Class

Click or drag to resize

ClusterScoreMethod Enumeration

Enum to indicate method to use while calculating score of a cluster.

Namespace: Bio.Algorithms.Alignment
Assembly: Bio.Core (in Bio.Core.dll) Version: 2.0.0.1 (2.0.0.1)

Syntax

public enum ClusterScoreMethod

Public Enumeration ClusterScoreMethod

public enum class ClusterScoreMethod

type ClusterScoreMethod

Members

	Member name	Value	Description
	MatchLength	0	Use sum of length of matches in a cluster.
	ReferenceOffset	1	Use Maximum(ReferenceStart + Length) - Min(RefereceStart) from matches in a cluster.

See Also

Reference

Bio.Algorithms.Alignment Namespace