| Cluster Class |
An ordered list of matches between two a pair of sequences
Inheritance HierarchyNamespace: Bio.Algorithms.Alignment
Assembly: Bio.Core (in Bio.Core.dll) Version: 2.0.0.1 (2.0.0.1)
SyntaxThe Cluster type exposes the following members.
Constructors| Name | Description | |
|---|---|---|
 | Cluster(IListMatchExtension) |
Initializes a new instance of the Cluster class
|
| Cluster(IListMatchExtension, Boolean) |
Initialize a reverse direction instance of the Cluster class
|
Properties| Name | Description | |
|---|---|---|
 | IsFused |
Gets or sets a value indicating whether the cluster is already fused
|
| IsReverseQueryDirection |
Returns TRUE if this is a REVERSE query sequence direction
|
| Matches |
Gets list of maximum unique matches inside the cluster
|
| QueryDirection |
Gets or sets the query sequence direction
FORWARD or REVERSE
|
Methods| Name | Description | |
|---|---|---|
| Equals | Determines whether the specified object is equal to the current object. (Inherited from Object.) |
 | Finalize | Allows an object to try to free resources and perform other cleanup operations before it is reclaimed by garbage collection. (Inherited from Object.) |
| GetHashCode | Serves as the default hash function. (Inherited from Object.) |
| GetType | Gets the Type of the current instance. (Inherited from Object.) |
| MemberwiseClone | Creates a shallow copy of the current Object. (Inherited from Object.) |
| ToString |
Converts RefStart, QueryStart, Length, Score, WrapScore, IsGood for each cluster to string.
(Overrides ObjectToString.) |
Fields| Name | Description | |
|---|---|---|
  | ForwardDirection |
Represents forward query sequence direction
|
| ReverseDirection |
Represents reverse query sequence direction
|
See Also