SequenceAlignment Class

A simple implementation of ISequenceAlignment that stores the result of an alignment.

Inheritance Hierarchy

SystemObject
Bio.Algorithms.AlignmentSequenceAlignment

Namespace: Bio.Algorithms.Alignment
Assembly: Bio.Core (in Bio.Core.dll) Version: 2.0.0.1 (2.0.0.1)

Syntax

public class SequenceAlignment : ISequenceAlignment

Public Class SequenceAlignment
	Implements ISequenceAlignment

public ref class SequenceAlignment : ISequenceAlignment

type SequenceAlignment =  
    class
        interface ISequenceAlignment
    end

The SequenceAlignment type exposes the following members.

Constructors

	Name	Description
	SequenceAlignment	Initializes a new instance of the SequenceAlignment class Default Constructor.
	SequenceAlignment(IEnumerableISequence)	Constructor which initializes the sequences.

Properties

	Name	Description
	AlignedSequences	Gets list of aligned sequences.
	Documentation	Gets or sets documentation for this alignment.
	Metadata	Gets any additional information about the Alignment.
	Sequences	Gets list of source sequences involved in the alignment.

Methods

	Name	Description
	Equals	Determines whether the specified object is equal to the current object. (Inherited from Object.)
	Finalize	Allows an object to try to free resources and perform other cleanup operations before it is reclaimed by garbage collection. (Inherited from Object.)
	GetHashCode	Serves as the default hash function. (Inherited from Object.)
	GetType	Gets the Type of the current instance. (Inherited from Object.)
	MemberwiseClone	Creates a shallow copy of the current Object. (Inherited from Object.)
	ToString	Converts the Aligned Sequences to string. (Overrides ObjectToString.)