FastQFormatType Enumeration

.NET Bio

AATree(T) Class

AATree(TKey, TValue) Class

Alphabets Class

AmbiguousDnaAlphabet Class

AmbiguousProteinAlphabet Class

AmbiguousRnaAlphabet Class

BigArray(T) Class

BigList(T) Class

CloneLibrary Class

CloneLibraryInformation Structure

DerivedSequence Class

DifferenceNode Class

DifferenceNode.CompareFeature Structure

DnaAlphabet Class

FastQFormatType Enumeration

IAlphabet Interface

IConsensusResolver Interface

IndexedItem(T) Class

IntersectOutputType Enumeration

IParameterValidator Interface

IQualitativeSequence Interface

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SequenceEqualityComparer Class

SequenceRange Class

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SequenceStatistics Class

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SubtractOutputType Enumeration

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FastQFormatType Enumeration

A FastQFormatType specifies the format of quality scores.

Namespace: Bio
Assembly: Bio.Core (in Bio.Core.dll) Version: 2.0.0.1 (2.0.0.1)

Syntax

public enum FastQFormatType

Public Enumeration FastQFormatType

public enum class FastQFormatType

type FastQFormatType

Members

	Member name	Value	Description
	Illumina_v1_8	0	Illumina 1.8 FastQFormatType. This type uses Phred quality scores ranges from 0 to 93 and are encoded using ASCII 33 to 126. Encoding base value is 33.
	Illumina_v1_5	1	Illumina 1.5 FastQFormatType. This type uses Phred quality scores ranges from 2 to 62 and are encoded using ASCII 66 to 126. Encoding base value is 64.
	Illumina_v1_3	2	Illumina 1.3 FastQFormatType. This type uses Phred quality scores ranges from 0 to 62 and are encoded using ASCII 64 to 126. Encoding base value is 64.
	Solexa_Illumina_v1_0	3	Solexa/Illumina 1.0 FastQFormatType. This type uses Solexa / Illumina quality scores ranges from -5 to 62 and are encoded using ASCII 59 to 126. Encoding base value is 64.
	Sanger	4	Sanger FastQFormatType. This type uses Phred quality scores ranges from 0 to 93 and are encoded using ASCII 33 to 126 Encoding base value is 33

See Also

Reference