IConsensusResolver Interface |
For example, one can construct consensus for a set of aligned sequences in the following way: Sequence 1: A G T C G A Sequence 2: A G G C - A Sequence 3: A G G T G - Consensus : A G G C G A
In the example here, we might choose the character that occurs maximum number of times for consensus This means that consensus for characters at position 1: {A, A, A} is A, while consensus for characters at position 3: {T, G, G} is G, and so on.
This interface provides the framework for consensus generation. Implement this interface to provide different implementations for building consensus.Namespace: Bio
The IConsensusResolver type exposes the following members.
Name | Description | |
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SequenceAlphabet |
Gets or sets sequence alphabet.
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Name | Description | |
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GetConsensus |
Find consensus symbol for a list of symbols.
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