MUMmerAligner Methods |
The MUMmerAligner type exposes the following members.
Name | Description | |
---|---|---|
![]() | Align(IEnumerableISequence) |
Align aligns the set of input sequences using the affine gap model
(gap open and gap extension penalties)
and returns the best alignment found.
|
![]() | Align(ISequence, IEnumerableISequence) |
Align aligns the reference sequence with query sequences using the affine gap model
(gap open and gap extension penalties)
and returns the best alignment found.
|
![]() | AlignSimple(IEnumerableISequence) |
Align the list of input sequences using a simple constant penalty gap model.
|
![]() | AlignSimple(ISequence, IEnumerableISequence) |
Align the reference sequence and query sequences using an affine gap model.
|
![]() | Equals | Determines whether the specified object is equal to the current object. (Inherited from Object.) |
![]() | Finalize | Allows an object to try to free resources and perform other cleanup operations before it is reclaimed by garbage collection. (Inherited from Object.) |
![]() | GetHashCode | Serves as the default hash function. (Inherited from Object.) |
![]() | GetType | Gets the Type of the current instance. (Inherited from Object.) |
![]() | MemberwiseClone | Creates a shallow copy of the current Object. (Inherited from Object.) |
![]() | ToString | Returns a string that represents the current object. (Inherited from Object.) |