MUMmerAligner Methods |
The MUMmerAligner type exposes the following members.
Name | Description | |
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Align(IEnumerableISequence) |
Align aligns the set of input sequences using the affine gap model
(gap open and gap extension penalties)
and returns the best alignment found.
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Align(ISequence, IEnumerableISequence) |
Align aligns the reference sequence with query sequences using the affine gap model
(gap open and gap extension penalties)
and returns the best alignment found.
| |
AlignSimple(IEnumerableISequence) |
Align the list of input sequences using a simple constant penalty gap model.
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AlignSimple(ISequence, IEnumerableISequence) |
Align the reference sequence and query sequences using an affine gap model.
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Equals | Determines whether the specified object is equal to the current object. (Inherited from Object.) | |
Finalize | Allows an object to try to free resources and perform other cleanup operations before it is reclaimed by garbage collection. (Inherited from Object.) | |
GetHashCode | Serves as the default hash function. (Inherited from Object.) | |
GetType | Gets the Type of the current instance. (Inherited from Object.) | |
MemberwiseClone | Creates a shallow copy of the current Object. (Inherited from Object.) | |
ToString | Returns a string that represents the current object. (Inherited from Object.) |