MUMmerAligner.AlignSimple Method (IEnumerable(ISequence))

MUMmerAlignerAlignSimple Method (IEnumerableISequence)

Align the list of input sequences using a simple constant penalty gap model.

Namespace: Bio.Algorithms.MUMmer
Assembly: Bio.Core (in Bio.Core.dll) Version: 2.0.0.1 (2.0.0.1)

Syntax

public IList<IPairwiseSequenceAlignment> AlignSimple(
	IEnumerable<ISequence> inputSequences
)

Public Function AlignSimple ( 
	inputSequences As IEnumerable(Of ISequence)
) As IList(Of IPairwiseSequenceAlignment)

public:
IList<IPairwiseSequenceAlignment^>^ AlignSimple(
	IEnumerable<ISequence^>^ inputSequences
)

member AlignSimple : 
        inputSequences : IEnumerable<ISequence> -> IList<IPairwiseSequenceAlignment>

inputSequences: Type: System.Collections.GenericIEnumerableISequence
The sequences to align.

Type: IListIPairwiseSequenceAlignment
A list of sequence alignments.