NucmerPairwiseAligner.Align Method (IEnumerable(ISequence))

NucmerPairwiseAlignerAlign Method (IEnumerableISequence)

Align aligns the set of input sequences using the affine gap model (gap open and gap extension penalties) and returns the best alignment found.

Namespace: Bio.Algorithms.Alignment
Assembly: Bio.Core (in Bio.Core.dll) Version: 2.0.0.1 (2.0.0.1)

Syntax

C++

Copy

public IList<ISequenceAlignment> Align(
	IEnumerable<ISequence> inputSequences
)

Public Function Align ( 
	inputSequences As IEnumerable(Of ISequence)
) As IList(Of ISequenceAlignment)

public:
virtual IList<ISequenceAlignment^>^ Align(
	IEnumerable<ISequence^>^ inputSequences
) sealed

abstract Align : 
        inputSequences : IEnumerable<ISequence> -> IList<ISequenceAlignment> 
override Align : 
        inputSequences : IEnumerable<ISequence> -> IList<ISequenceAlignment>

Parameters

inputSequences: Type: System.Collections.GenericIEnumerableISequence
The sequences to align.

Return Value

Type: IListISequenceAlignment

[Missing <returns> documentation for "M:Bio.Algorithms.Alignment.NucmerPairwiseAligner.Align(System.Collections.Generic.IEnumerable{Bio.ISequence})"]

Implements

ISequenceAlignerAlign(IEnumerableISequence)

Reference

NucmerPairwiseAligner Class

Align Overload

Bio.Algorithms.Alignment Namespace