NUCmer.GetClusters Method (List(MatchExtension), Boolean)

NUCmerGetClusters Method (ListMatchExtension, Boolean)

get the clusters

Namespace: Bio.Algorithms.Alignment
Assembly: Bio.Core (in Bio.Core.dll) Version: 2.0.0.1 (2.0.0.1)

Syntax

public IList<Cluster> GetClusters(
	List<MatchExtension> matchExtensionList,
	bool sortedMatches
)

Public Function GetClusters ( 
	matchExtensionList As List(Of MatchExtension),
	sortedMatches As Boolean
) As IList(Of Cluster)

public:
IList<Cluster^>^ GetClusters(
	List<MatchExtension^>^ matchExtensionList, 
	bool sortedMatches
)

member GetClusters : 
        matchExtensionList : List<MatchExtension> * 
        sortedMatches : bool -> IList<Cluster>

matchExtensionList: Type: System.Collections.GenericListMatchExtension
List of Matches of a read.
sortedMatches: Type: SystemBoolean
Flag to indicate that the matches are sorted or not.

Type: IListCluster
List of clusters