MatchExtension Class

Maximum Unique Match Class.

Inheritance Hierarchy

SystemObject
Bio.Algorithms.SuffixTreeMatchExtension

Namespace: Bio.Algorithms.SuffixTree
Assembly: Bio.Core (in Bio.Core.dll) Version: 2.0.0.1 (2.0.0.1)

Syntax

public class MatchExtension

Public Class MatchExtension

public ref class MatchExtension

type MatchExtension =  class end

The MatchExtension type exposes the following members.

Constructors

	Name	Description
	MatchExtension	Initializes a new instance of the MaxUniqueMatchExtension class
	MatchExtension(Match)	Initializes a new instance of the MaxUniqueMatchExtension class

Methods

	Name	Description
	CopyTo	Copy the content to MUM.
	Equals	Determines whether the specified object is equal to the current object. (Inherited from Object.)
	Finalize	Allows an object to try to free resources and perform other cleanup operations before it is reclaimed by garbage collection. (Inherited from Object.)
	GetHashCode	Serves as the default hash function. (Inherited from Object.)
	GetType	Gets the Type of the current instance. (Inherited from Object.)
	MemberwiseClone	Creates a shallow copy of the current Object. (Inherited from Object.)
	ToString	Converts RefStart, QueryStart, Length, Score, WrapScore, IsGood of MatchExtension to string. (Overrides ObjectToString.)

Fields

	Name	Description
	Adjacent	Gets or sets offset to adjacent MUM.
	From	Gets or sets From (index representing the previous MUM to form LIS) of MUM.
	ID	Gets or sets cluster Identifier.
	IsGood	Gets or sets a value indicating whether MUM is Good candidate.
	IsTentative	Gets or sets a value indicating whether MUM is Tentative candidate.
	Length	Gets or sets the length of match.
	Query	Gets or sets the Query sequence.
	QuerySequenceMumOrder	Gets or sets Sequence Two's MaxUniqueMatch order.
	QuerySequenceOffset	Gets or sets start index of this match in query sequence.
	ReferenceSequenceMumOrder	Gets or sets Sequence one's MaxUniqueMatch order.
	ReferenceSequenceOffset	Gets or sets the start index of this match in reference sequence.
	Score	Gets or sets score of MUM.
	WrapScore	Gets or sets wrap score.