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NUCmerGetClusters Method (ISequence, Boolean, Boolean)
Gets the clusters

Namespace: Bio.Algorithms.Alignment
Assembly: Bio.Core (in Bio.Core.dll) Version: 2.0.0.1 (2.0.0.1)
Syntax
public IList<Cluster> GetClusters(
	ISequence querySequence,
	bool isUniqueInReference = true,
	bool isReversed = false
)

Parameters

querySequence
Type: BioISequence
Query sequence.
isUniqueInReference (Optional)
Type: SystemBoolean
flag to indicate that the matches should be unique in reference.
isReversed (Optional)
Type: SystemBoolean
True if the query sequence is a reverse-complement

Return Value

Type: IListCluster
Returns clusters.
See Also