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DynamicProgrammingPairwiseAlignerJobComputeTraceBlock Method
Computes the traceback pointers for the block. Assumes the grid cache has been already filled during the forward pass

Namespace: Bio.Algorithms.Alignment
Assembly: Bio.Core (in Bio.Core.dll) Version: 2.0.0.1 (2.0.0.1)
Syntax
protected abstract void ComputeTraceBlock(
	int blockRow,
	int blockCol,
	int lastRow,
	int lastCol,
	sbyte[][] trace
)

Parameters

blockRow
Type: SystemInt32
First index of the block within the grid
blockCol
Type: SystemInt32
Second index of the block within the grid
lastRow
Type: SystemInt32
Last valid row index within the block; rows beyond this index stay uninitialized
lastCol
Type: SystemInt32
Last valid column index within the block; columns beyond this index stay uninitialized
trace
Type: SystemSByte
Array of traceback pointers
See Also