DynamicProgrammingPairwiseAlignerJobComputeCornerBlock Method |
Computes the lower-right corner block of the grid.
Combines the forward and traceback passes for performance.
This is the only block computation that takes place for smaller-than-block alignments
Namespace: Bio.Algorithms.AlignmentAssembly: Bio.Core (in Bio.Core.dll) Version: 2.0.0.1 (2.0.0.1)
Syntax protected abstract void ComputeCornerBlock(
int blockRow,
int blockCol,
int lastRow,
int lastCol,
sbyte[][] trace
)
Protected MustOverride Sub ComputeCornerBlock (
blockRow As Integer,
blockCol As Integer,
lastRow As Integer,
lastCol As Integer,
trace As SByte()()
)
protected:
virtual void ComputeCornerBlock(
int blockRow,
int blockCol,
int lastRow,
int lastCol,
array<array<signed char>^>^ trace
) abstract
abstract ComputeCornerBlock :
blockRow : int *
blockCol : int *
lastRow : int *
lastCol : int *
trace : sbyte[][] -> unit
Parameters
- blockRow
- Type: SystemInt32
First index of the block within the grid - blockCol
- Type: SystemInt32
Second index of the block within the grid - lastRow
- Type: SystemInt32
Last valid row index within the block; rows beyond this index stay uninitialized - lastCol
- Type: SystemInt32
Last valid column index within the block; columns beyond this index stay uninitialized - trace
- Type: SystemSByte
Array of traceback pointers
See Also