| DynamicProgrammingPairwiseAlignerJobComputeBlockAffine Method  | 
            Implementation of the linear programming model for the block using the affine gap cost model
            
 
Namespace: Bio.Algorithms.AlignmentAssembly: Bio.Core (in Bio.Core.dll) Version: 2.0.0.1 (2.0.0.1)
Syntaxprotected void ComputeBlockAffine(
	DynamicProgrammingPairwiseAlignerJobWeightFunction weightFunction,
	int blockRow,
	int blockCol,
	int lastRow,
	int lastCol
)
Protected Sub ComputeBlockAffine ( 
	weightFunction As DynamicProgrammingPairwiseAlignerJobWeightFunction,
	blockRow As Integer,
	blockCol As Integer,
	lastRow As Integer,
	lastCol As Integer
)
protected:
void ComputeBlockAffine(
	DynamicProgrammingPairwiseAlignerJobWeightFunction^ weightFunction, 
	int blockRow, 
	int blockCol, 
	int lastRow, 
	int lastCol
)
member ComputeBlockAffine : 
        weightFunction : DynamicProgrammingPairwiseAlignerJobWeightFunction * 
        blockRow : int * 
        blockCol : int * 
        lastRow : int * 
        lastCol : int -> unit 
Parameters
- weightFunction
 - Type: Bio.Algorithms.AlignmentDynamicProgrammingPairwiseAlignerJobWeightFunction
Algorith-specific weight function - blockRow
 - Type: SystemInt32
First index of the block within the grid - blockCol
 - Type: SystemInt32
Second index of the block within the grid - lastRow
 - Type: SystemInt32
Last valid row index within the block; rows beyond this index stay uninitialized - lastCol
 - Type: SystemInt32
Last valid column index within the block; columns beyond this index stay uninitialized 
See Also