QualitativeSequence Constructor (IAlphabet, FastQFormatType, Byte[], Byte[])

QualitativeSequence Constructor (IAlphabet, FastQFormatType, Byte, Byte)

Initializes a new instance of the QualitativeSequence class with specified alphabet, quality score type, byte array representing symbols and encoded quality scores. Sequence and quality scores are validated with the specified alphabet and specified fastq format respectively.

Namespace: Bio
Assembly: Bio.Core (in Bio.Core.dll) Version: 2.0.0.1 (2.0.0.1)

Syntax

C++

Copy

public QualitativeSequence(
	IAlphabet alphabet,
	FastQFormatType fastQFormatType,
	byte[] sequence,
	byte[] encodedQualityScores
)

Public Sub New ( 
	alphabet As IAlphabet,
	fastQFormatType As FastQFormatType,
	sequence As Byte(),
	encodedQualityScores As Byte()
)

public:
QualitativeSequence(
	IAlphabet^ alphabet, 
	FastQFormatType fastQFormatType, 
	array<unsigned char>^ sequence, 
	array<unsigned char>^ encodedQualityScores
)

new : 
        alphabet : IAlphabet * 
        fastQFormatType : FastQFormatType * 
        sequence : byte[] * 
        encodedQualityScores : byte[] -> QualitativeSequence

Parameters

alphabet: Type: BioIAlphabet
Alphabet to which this instance should conform.
fastQFormatType: Type: BioFastQFormatType
FastQ format type.
sequence: Type: SystemByte
An array of bytes representing the symbols.
encodedQualityScores: Type: SystemByte
An array of bytes representing the encoded quality scores.

Reference

QualitativeSequence Class

QualitativeSequence Overload

Bio Namespace