PairedReadGetPairedReadType Method (PairedRead, Single, Single, Boolean) |
Gets the paired reads type.
Namespace: Bio.IO.SAMAssembly: Bio.Core (in Bio.Core.dll) Version: 2.0.0.1 (2.0.0.1)
Syntax public static PairedReadType GetPairedReadType(
PairedRead pairedRead,
float meanLengthOfInsert,
float standardDeviationOfInsert,
bool useInsertLengthOfReads
)
Public Shared Function GetPairedReadType (
pairedRead As PairedRead,
meanLengthOfInsert As Single,
standardDeviationOfInsert As Single,
useInsertLengthOfReads As Boolean
) As PairedReadType
public:
static PairedReadType GetPairedReadType(
PairedRead^ pairedRead,
float meanLengthOfInsert,
float standardDeviationOfInsert,
bool useInsertLengthOfReads
)
static member GetPairedReadType :
pairedRead : PairedRead *
meanLengthOfInsert : float32 *
standardDeviationOfInsert : float32 *
useInsertLengthOfReads : bool -> PairedReadType
Parameters
- pairedRead
- Type: Bio.IO.SAMPairedRead
Paired read. - meanLengthOfInsert
- Type: SystemSingle
Mean of the insertion length. - standardDeviationOfInsert
- Type: SystemSingle
Standard deviation of insertion length. - useInsertLengthOfReads
- Type: SystemBoolean
If this flag is set to true then insert length will be calculated from read1 and read2,
else InsertLength in spcified paired read will be used.
By default this will be set to false.
Return Value
Type:
PairedReadType[Missing <returns> documentation for "M:Bio.IO.SAM.PairedRead.GetPairedReadType(Bio.IO.SAM.PairedRead,System.Single,System.Single,System.Boolean)"]
See Also