SAMParserParseQualityNSequence Method (SAMAlignedSequence, IAlphabet, String, String) |
Parses sequence data and quality values and updates SAMAlignedSequence instance.
Namespace: Bio.IO.SAMAssembly: Bio.Core (in Bio.Core.dll) Version: 2.0.0.1 (2.0.0.1)
Syntax public static void ParseQualityNSequence(
SAMAlignedSequence alignedSeq,
IAlphabet alphabet,
string sequencedata,
string qualitydata
)
Public Shared Sub ParseQualityNSequence (
alignedSeq As SAMAlignedSequence,
alphabet As IAlphabet,
sequencedata As String,
qualitydata As String
)
public:
static void ParseQualityNSequence(
SAMAlignedSequence^ alignedSeq,
IAlphabet^ alphabet,
String^ sequencedata,
String^ qualitydata
)
static member ParseQualityNSequence :
alignedSeq : SAMAlignedSequence *
alphabet : IAlphabet *
sequencedata : string *
qualitydata : string -> unit
Parameters
- alignedSeq
- Type: Bio.IO.SAMSAMAlignedSequence
SAM aligned Sequence. - alphabet
- Type: BioIAlphabet
Alphabet of the sequence to be created. - sequencedata
- Type: SystemString
Sequence data. - qualitydata
- Type: SystemString
Quality values.
See Also