SequenceToKmerBuilder.Build Method (ISequence, Int32)

SequenceToKmerBuilderBuild Method (ISequence, Int32)

For input sequence, constructs k-mers by sliding a frame of size kmerLength along the input sequence. Track positions of occurrence for each kmer in sequence. Constructs KmersOfSequence for sequence and associated k-mers.

Namespace: Bio.Algorithms.Kmer
Assembly: Bio.Core (in Bio.Core.dll) Version: 2.0.0.1 (2.0.0.1)

Syntax

C++

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public KmersOfSequence Build(
	ISequence sequence,
	int kmerLength
)

Public Function Build ( 
	sequence As ISequence,
	kmerLength As Integer
) As KmersOfSequence

public:
virtual KmersOfSequence^ Build(
	ISequence^ sequence, 
	int kmerLength
) sealed

abstract Build : 
        sequence : ISequence * 
        kmerLength : int -> KmersOfSequence 
override Build : 
        sequence : ISequence * 
        kmerLength : int -> KmersOfSequence

Parameters

sequence: Type: BioISequence
Input sequence.
kmerLength: Type: SystemInt32
K-mer length.

Return Value

Type: KmersOfSequence
KmersOfSequence constructed from sequence and associated k-mers.

Implements

IKmerBuilderBuild(ISequence, Int32)

Reference

SequenceToKmerBuilder Class

Build Overload

Bio.Algorithms.Kmer Namespace