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ISequence Methods

The ISequence type exposes the following members.

Methods
  NameDescription
Public methodGetComplementedSequence
Return a sequence representing the complement of this sequence.
Public methodGetEnumerator
Returns an enumerator that iterates through the collection.
(Inherited from IEnumerableByte.)
Public methodGetReverseComplementedSequence
Return a sequence representing the reverse complement of this sequence.
Public methodGetReversedSequence
Return a sequence representing this sequence with the orientation reversed.
Public methodGetSubSequence
Return a sequence representing a range (subsequence) of this sequence.
Public methodIndexOfNonGap
Gets the index of first non gap symbol.
Public methodIndexOfNonGap(Int64)
Returns the position of the first item beyond startPos that does not have a Gap symbol.
Public methodLastIndexOfNonGap
Gets the index of last non gap symbol.
Public methodLastIndexOfNonGap(Int64)
Gets the index of last non gap symbol before the specified end position.
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Extension Methods
  NameDescription
Public Extension MethodAppendByte(Byte)Overloaded.
Yield an Enumeration of the list with the item appended to the end
(Defined by IEnumerableExtensions.)
Public Extension MethodAppendByte(IEnumerableByte)Overloaded.
Yield a concatenation of the two Enumerable lists
(Defined by IEnumerableExtensions.)
Public Extension MethodConvertToString
Converts the sequence to a string.
(Defined by SequenceExtensions.)
Public Extension MethodElementAtByte
Returns the element at a specified index in a sequence.
(Defined by IEnumerableExtensions.)
Public Extension MethodForEachByte(ActionByte)Overloaded.
Calls an action on each element of a sequence. The action takes one argument: an element. It has no return value.
(Defined by IEnumerableExtensions.)
Public Extension MethodForEachByte(ActionByte, Int32)Overloaded.
Calls an action on each element of a sequence. The action takes two arguments: an element and the index of the element. It has no return value.
(Defined by IEnumerableExtensions.)
Public Extension MethodIsMarkedAsReverseComplement
This checks for a sequence marker to determine if the given ISequence was generated from a reverse complement.
(Defined by SequenceExtensions.)
Public Extension MethodMarkAsReverseComplement
This adds a key to the Metadata to indicate this is a reversed sequence
(Defined by SequenceExtensions.)
Public Extension MethodShuffleByte
Shuffles the elements of a sequence.
(Defined by IEnumerableExtensions.)
Public Extension MethodStringJoinOverloaded.
Creates a string from a sequence of elements. No delimiter is used.
(Defined by IEnumerableExtensions.)
Public Extension MethodStringJoin(String)Overloaded.
Creates a delimited string from a sequence of elements.
(Defined by IEnumerableExtensions.)
Public Extension MethodStringJoin(String, Int32, String)Overloaded.
Creates a delimited string from a sequence of elements. At most maxLength elements will be used and "..." shows that more elements were in the list.
(Defined by IEnumerableExtensions.)
Public Extension MethodSubSequenceByte
Take the items from a sequence starting with item # start (index 0) and contining for count items.
(Defined by IEnumerableExtensions.)
Public Extension MethodToHashSetByteOverloaded.
Creates a HashSet from a sequence. If the sequence is already a HashSet, a new HashSet is still created.
(Defined by IEnumerableExtensions.)
Public Extension MethodToHashSetByte(IEqualityComparerByte)Overloaded.
Creates a HashSet from a sequence. If the sequence is already a HashSet, a new HashSet is still created.
(Defined by IEnumerableExtensions.)
Public Extension MethodToQueueByte
Creates a Queue from a sequence. If the sequence is already a Queue, a new Queue is still created.
(Defined by IEnumerableExtensions.)
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See Also