GZipFastAParser Class |
Namespace: Bio.IO
The GZipFastAParser type exposes the following members.
Name | Description | |
---|---|---|
GZipFastAParser | Initializes a new instance of the GZipFastAParser class |
Name | Description | |
---|---|---|
Alphabet |
Gets or sets the alphabet to use for parsed ISequence objects. If this is not set, the alphabet will
be determined based on the file being parsed.
(Inherited from GZipSequenceParserT, TItem.) | |
Description |
Gets the description of the parser being
implemented. This is intended to give the
developer some information of the parser.
(Inherited from GZipParserTP, T.) | |
Name |
Gets the name of the parser being implemented.
This is intended to give the developer name of the parser.
(Inherited from GZipParserTP, T.) | |
SupportedFileTypes |
Gets the file extensions that the parser supports.
If multiple extensions are supported then this property
will return a string containing all extensions with a ',' delimited.
(Inherited from GZipParserTP, T.) |
Name | Description | |
---|---|---|
CanProcessFile |
Initializes a new instance of the FastAParser class by
loading the specified filename and ensuring that it ends with ".gz"
(Inherited from GZipParserTP, T.) | |
Equals | Determines whether the specified object is equal to the current object. (Inherited from Object.) | |
Finalize | Allows an object to try to free resources and perform other cleanup operations before it is reclaimed by garbage collection. (Inherited from Object.) | |
GetHashCode | Serves as the default hash function. (Inherited from Object.) | |
GetType | Gets the Type of the current instance. (Inherited from Object.) | |
MemberwiseClone | Creates a shallow copy of the current Object. (Inherited from Object.) | |
Parse |
Parses a list of biological sequence texts from a given stream.
(Inherited from GZipParserTP, T.) | |
ParseOne |
Parse a single data sequence from the file.
(Inherited from GZipParserTP, T.) | |
ToString | Returns a string that represents the current object. (Inherited from Object.) |
Name | Description | |
---|---|---|
Parser |
Inner parser
(Inherited from GZipParserTP, T.) |