GZipSequenceParserT, TItem Class |
Namespace: Bio.IO
public class GZipSequenceParser<T, TItem> : GZipParser<T, TItem>, IParserWithAlphabet<TItem>, IParser<TItem>, IParser where T : class, new(), Object, IParserWithAlphabet<TItem>
The GZipSequenceParserT, TItem type exposes the following members.
Name | Description | |
---|---|---|
GZipSequenceParserT, TItem | Initializes a new instance of the GZipSequenceParserT, TItem class |
Name | Description | |
---|---|---|
Alphabet |
Gets or sets the alphabet to use for parsed ISequence objects. If this is not set, the alphabet will
be determined based on the file being parsed.
| |
Description |
Gets the description of the parser being
implemented. This is intended to give the
developer some information of the parser.
(Inherited from GZipParserTP, T.) | |
Name |
Gets the name of the parser being implemented.
This is intended to give the developer name of the parser.
(Inherited from GZipParserTP, T.) | |
SupportedFileTypes |
Gets the file extensions that the parser supports.
If multiple extensions are supported then this property
will return a string containing all extensions with a ',' delimited.
(Inherited from GZipParserTP, T.) |
Name | Description | |
---|---|---|
CanProcessFile |
Initializes a new instance of the FastAParser class by
loading the specified filename and ensuring that it ends with ".gz"
(Inherited from GZipParserTP, T.) | |
Equals | Determines whether the specified object is equal to the current object. (Inherited from Object.) | |
Finalize | Allows an object to try to free resources and perform other cleanup operations before it is reclaimed by garbage collection. (Inherited from Object.) | |
GetHashCode | Serves as the default hash function. (Inherited from Object.) | |
GetType | Gets the Type of the current instance. (Inherited from Object.) | |
MemberwiseClone | Creates a shallow copy of the current Object. (Inherited from Object.) | |
Parse |
Parses a list of biological sequence texts from a given stream.
(Inherited from GZipParserTP, T.) | |
ParseOne |
Parse a single data sequence from the file.
(Inherited from GZipParserTP, T.) | |
ToString | Returns a string that represents the current object. (Inherited from Object.) |
Name | Description | |
---|---|---|
Parser |
Inner parser
(Inherited from GZipParserTP, T.) |