| DeltaAlignmentCollection Class |
Namespace: Bio.Util
The DeltaAlignmentCollection type exposes the following members.
| Name | Description | |
|---|---|---|
| DeltaAlignmentCollection(Stream, FastASequencePositionParser) |
Initializes a new instance of the DeltaAlignmentCollection class.
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| DeltaAlignmentCollection(Stream, Stream) |
Initializes a new instance of the DeltaAlignmentCollection class.
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| Name | Description | |
|---|---|---|
| Count |
Gets the no of delta alignment present in this collection.
| |
| DeltaAlignmentParser |
Gets the DeltaAlignment parser.
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| DeltaAlignmentStream |
Gets Delta alignments file name.
| |
| Item |
Gets the Delta alignment present at the specified index.
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| QueryStream |
Gets Query or read file name.
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| Name | Description | |
|---|---|---|
| Dispose |
Disposes the underlying streams used.
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| Dispose(Boolean) |
Disposes the underlying streams used.
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| Equals | Determines whether the specified object is equal to the current object. (Inherited from Object.) | |
| Finalize | Allows an object to try to free resources and perform other cleanup operations before it is reclaimed by garbage collection. (Inherited from Object.) | |
| GetDeltaAlignmentFor |
Gets the list of delta alignments for the specified sequence id.
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| GetDeltaAlignmentsByReads |
Gets Delta alignments grouped by read sequence id.
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| GetHashCode | Serves as the default hash function. (Inherited from Object.) | |
| GetType | Gets the Type of the current instance. (Inherited from Object.) | |
| MemberwiseClone | Creates a shallow copy of the current Object. (Inherited from Object.) | |
| ToString | Returns a string that represents the current object. (Inherited from Object.) |