DiagonalSimilarityMatrix Class |
Namespace: Bio.SimilarityMatrices
The DiagonalSimilarityMatrix type exposes the following members.
Name | Description | |
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DiagonalSimilarityMatrix |
Initializes a new instance of the DiagonalSimilarityMatrix class.
Creates a SimilarityMatrix with one value for match and one for mis-match.
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Name | Description | |
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DiagonalValue |
Gets or sets the diagonal value (match value) for the diagonal similarity matrix.
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Item |
Returns value of diagonal similarity matrix at [row,col].
(Overrides SimilarityMatrixItemInt32, Int32.) | |
Matrix |
Gets or sets similarity matrix values in a 2-D integer array.
(Inherited from SimilarityMatrix.) | |
Name |
Gets or sets descriptive name of the particular SimilarityMatrix being used.
(Inherited from SimilarityMatrix.) | |
OffDiagonalValue |
Gets or sets the off diagonal value (mis-match value for the diagonal similarity matrix.
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Name | Description | |
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Equals | Determines whether the specified object is equal to the current object. (Inherited from Object.) | |
Finalize | Allows an object to try to free resources and perform other cleanup operations before it is reclaimed by garbage collection. (Inherited from Object.) | |
GetHashCode | Serves as the default hash function. (Inherited from Object.) | |
GetType | Gets the Type of the current instance. (Inherited from Object.) | |
MemberwiseClone | Creates a shallow copy of the current Object. (Inherited from Object.) | |
ToString | Returns a string that represents the current object. (Inherited from Object.) | |
ValidateSequence |
Confirms that there is a symbol in the similarity matrix for every
symbol in the sequence.
(Inherited from SimilarityMatrix.) |
Name | Description | |
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supportedAlphabets | (Inherited from SimilarityMatrix.) |