Converts Encoded quality score from to specified format.

Converts Encoded quality scores from to specified format.

Converts Quality score from to specified format.

Converts Quality scores from to specified format.

Converts Quality scores from to specified format.

Converts the current instance to the specified FastQ format type and returns a new instance of QualitativeSequence.

Determines whether the specified object is equal to the current object.

Allows an object to try to free resources and perform other cleanup operations before it is reclaimed by garbage collection.

Return a new QualitativeSequence representing the complement of this QualitativeSequence.

Gets the default quality score for the specified FastQFormatType.

Gets the encoded quality score found at the specified index if within bounds. Note that the index value start at 0.

Gets the encoded quality scores.

Gets an enumerator to the bytes present symbols in this sequence.

Serves as the default hash function.

Gets the maximum encoded quality score for the specified FastQFormatType.

Gets the minimum encoded quality score for the specified FastQFormatType.

Gets the Phred base quality score.

Gets the Phred base quality scores.

Returns base quality scores at specified index. Returns Solexa quality scores if the FastQFormat type of this instance is Solexa Illumina v1.0, else returns Phred quality scores.

Returns base quality scores. Returns Solexa quality scores if the FastQFormat type of this instance is Solexa Illumina v1.0, else returns Phred quality scores.

Return a new QualitativeSequence representing the reverse complement of this QualitativeSequence.

Return a new QualitativeSequence representing this QualitativeSequence with the orientation reversed.

Gets the Solexa base quality score.

Gets the solexa base quality scores.

Return a new QualitativeSequence representing a range (subsequence) of this QualitativeSequence.

Gets the Type of the current instance.

Gets the index of first non-gap symbol.

Returns the position of the first symbol beyond startPos that does not have a Gap symbol.

Gets the index of last non-gap symbol.

Returns the index of last non-gap symbol before the specified end position.

Creates a shallow copy of the current Object.

Returns a string representation of the Qualitative sequence data. This representation will come from the symbols in the alphabet defined for the sequence. Also their Quality scores.

Validates whether the specified encoded quality scores are within the FastQFormatType limit or not.

Yield an Enumeration of the list with the item appended to the end

Yield a concatenation of the two Enumerable lists

Converts the sequence to a string.

Returns the element at a specified index in a sequence.

Calls an action on each element of a sequence. The action takes one argument: an element. It has no return value.

Calls an action on each element of a sequence. The action takes two arguments: an element and the index of the element. It has no return value.

This checks for a sequence marker to determine if the given ISequence was generated from a reverse complement.

This adds a key to the Metadata to indicate this is a reversed sequence

Shuffles the elements of a sequence.

Creates a string from a sequence of elements. No delimiter is used.

Creates a delimited string from a sequence of elements.

Creates a delimited string from a sequence of elements. At most maxLength elements will be used and "..." shows that more elements were in the list.

Take the items from a sequence starting with item # start (index 0) and contining for count items.

Creates a HashSet from a sequence. If the sequence is already a HashSet, a new HashSet is still created.

Creates a HashSet from a sequence. If the sequence is already a HashSet, a new HashSet is still created.

Creates a Queue from a sequence. If the sequence is already a Queue, a new Queue is still created.