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NUCmerGetDeltaAlignments Method
Generates Delta Alignments.

Namespace: Bio.Algorithms.Alignment
Assembly: Bio.Core (in Bio.Core.dll) Version: 2.0.0.1 (2.0.0.1)
Syntax
public IEnumerable<DeltaAlignment> GetDeltaAlignments(
	ISequence querySequence,
	bool isUniqueInReference = true,
	bool isReversed = false
)

Parameters

querySequence
Type: BioISequence
Query Sequence
isUniqueInReference (Optional)
Type: SystemBoolean
Whether MUMs are unique in query or not.
isReversed (Optional)
Type: SystemBoolean
True if the query sequence is a reverse-complement

Return Value

Type: IEnumerableDeltaAlignment
List of enumerable of delta alignments.
See Also