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SequenceAligners Properties

The SequenceAligners type exposes the following members.

Properties
  NameDescription
Public propertyStatic memberAll
Gets the list of all aligners which is supported by the framework.
Public propertyStatic memberMUMmer
Gets an instance of MUMmer3 class which implements the MUMmer algorithm for partial alignment
Public propertyStatic memberNeedlemanWunsch
Gets an instance of NeedlemanWunschAligner class which implements the NeedlemanWunsch algorithm for global alignment.
Public propertyStatic memberNUCmer
Gets an instance of NUCmer3 class which implements the NUCmer algorithm for alignment
Public propertyStatic memberSmithWaterman
Gets an instance of SmithWatermanAligner class which implements the SmithWaterman algorithm for partial alignment
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See Also