| FastASequencePositionParser Class |
This class is similar to FastAParser except that this class appends the
position of the sequence parsed to its id.
Inheritance HierarchyNamespace: Bio.Util
Assembly: Bio.Core (in Bio.Core.dll) Version: 2.0.0.1 (2.0.0.1)
SyntaxThe FastASequencePositionParser type exposes the following members.
Constructors| Name | Description | |
|---|---|---|
 | FastASequencePositionParser |
Initializes a new instance of the FastASequencePositionParser class by
loading the specified stream.
|
Properties| Name | Description | |
|---|---|---|
 | Alphabet |
Gets or sets the alphabet to use for parsed ISequence objects. If this is not set, the alphabet will
be determined based on the file being parsed.
|
| SequencesCached |
Gets a value indicating whether the sequences are cached or not.
|
| Stream |
Stream for this parser.
|
Methods| Name | Description | |
|---|---|---|
| CacheSequencesForRandomAccess |
Loads sequences to cache.
This method will ignore the call if sequences are already cached.
|
| Dispose |
Disposes the underlying stream.
|
 | Dispose(Boolean) |
Disposes the underlying stream.
|
| Equals | Determines whether the specified object is equal to the current object. (Inherited from Object.) |
| Finalize | Allows an object to try to free resources and perform other cleanup operations before it is reclaimed by garbage collection. (Inherited from Object.) |
| GetHashCode | Serves as the default hash function. (Inherited from Object.) |
| GetSequenceAt |
Gets the sequence at specified position.
|
| GetType | Gets the Type of the current instance. (Inherited from Object.) |
| MemberwiseClone | Creates a shallow copy of the current Object. (Inherited from Object.) |
| Parse |
Returns an IEnumerable of sequences in the file being parsed.
|
| ToString | Returns a string that represents the current object. (Inherited from Object.) |
See Also