ISequenceAligner.GapOpenCost Property

ISequenceAlignerGapOpenCost Property

Gets or sets value of GapOpenCost The GapOpenCost is the cost of inserting a gap character into a sequence.

Namespace: Bio.Algorithms.Alignment
Assembly: Bio.Core (in Bio.Core.dll) Version: 2.0.0.1 (2.0.0.1)

Syntax

int GapOpenCost { get; set; }

Property GapOpenCost As Integer
	Get
	Set

property int GapOpenCost {
	int get ();
	void set (int value);
}

abstract GapOpenCost : int with get, set

Type: Int32

Remarks

In the linear gap model, all gaps use this cost. In the affine gap model, the GapExtensionCost below is also used.