SparseSequence Properties |
The SparseSequence type exposes the following members.
Name | Description | |
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Alphabet |
The alphabet to which string representations of the sequence should
conform.
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Count |
The number of sequence items contained in the Sequence.
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ID |
An identification provided to distinguish the sequence to others
being worked with.
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Item |
Allows the sequence to function like an array, gets
the sequence item at the specified index. Note that the
index value starts its count at 0.
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Metadata |
Many sequence representations when saved to file also contain
information about that sequence. Unfortunately there is no standard
around what that data may be from format to format. This property
allows a place to put structured metadata that can be accessed by
a particular key.
For example, if species information is stored in a particular Species
class, you could add it to the dictionary by:
mySequence.Metadata["SpeciesInfo"] = mySpeciesInfo;
To fetch the data you would use:
Species mySpeciesInfo = mySequence.Metadata["SpeciesInfo"];
Particular formats may create their own data model class for information
unique to their format as well. Such as:
GenBankMetadata genBankData = new GenBankMetadata();
// ... add population code
mySequence.MetaData["GenBank"] = genBankData;
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Statistics |
Keeps track of the number of occurrences of each symbol within a sequence.
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